shell: fish functions -> ~/.local/bin executables + bash/zsh ports; manage ~/.agents

- 16 cross-shell utilities converted to sh/bash chezmoi executables:
  ai c2p cp-appid extract_agents fab gdc gh-sonr-org-migrate ghg-clone
  ghn gho git-summary launch_omp_livediff_overlay lc-elir mdcp mdp pj
  (ghg-clone not named ghg: unrelated cargo binary owns that name)
- cwd/history helpers stay per-shell: yy c cd clip-last + ghg/ghn/gho
  cd-wrappers in bash/functions/ and zsh/functions/, loaded by rc files
- fish keeps only shell-state functions; converted ones now hit PATH
- cp-appid ignore gating moved to .local/bin path
- dot_agents/skills: 82 skills materialized from dotstate storage so
  dot_claude skill symlinks resolve on fresh bootstrap; dotstate
  profile/symlinks.json released .agents/skills .bashrc .zshrc

dot_local/bin/executable_extract_agents

@@ -0,0 +1,16 @@
+#!/bin/sh
+# Copy all AGENTS.md files to a target directory while preserving structure.
+out_dir=$1
+
+if [ -z "$out_dir" ]; then
+    echo "Error: Output directory required." >&2
+    echo "Usage: extract_agents <absolute_or_relative_output_path>" >&2
+    exit 1
+fi
+
+mkdir -p "$out_dir"
+
+# Find and copy preserving relative paths
+fd -t f -g "AGENTS.md" -x cp --parents "{}" "$out_dir"
+
+echo "Extraction complete. Check $out_dir."