shell: fish functions -> ~/.local/bin executables + bash/zsh ports; manage ~/.agents

- 16 cross-shell utilities converted to sh/bash chezmoi executables:
  ai c2p cp-appid extract_agents fab gdc gh-sonr-org-migrate ghg-clone
  ghn gho git-summary launch_omp_livediff_overlay lc-elir mdcp mdp pj
  (ghg-clone not named ghg: unrelated cargo binary owns that name)
- cwd/history helpers stay per-shell: yy c cd clip-last + ghg/ghn/gho
  cd-wrappers in bash/functions/ and zsh/functions/, loaded by rc files
- fish keeps only shell-state functions; converted ones now hit PATH
- cp-appid ignore gating moved to .local/bin path
- dot_agents/skills: 82 skills materialized from dotstate storage so
  dot_claude skill symlinks resolve on fresh bootstrap; dotstate
  profile/symlinks.json released .agents/skills .bashrc .zshrc

dot_agents/skills/teach/GLOSSARY-FORMAT.md

@@ -0,0 +1,35 @@
+# GLOSSARY.md Format
+
+`GLOSSARY.md` is the canonical language for this teaching workspace. All explainers, exercises, and learning records should adhere to its terminology. Building it is itself part of learning: compressing a concept into a tight definition is evidence the user understands it.
+
+## Structure
+
+```md
+# {Topic} Glossary
+
+{One or two sentence description of the topic this glossary covers.}
+
+## Terms
+
+**Hypertrophy**:
+Muscle growth driven by mechanical tension and metabolic stress over repeated training sessions.
+_Avoid_: Bulking, getting big
+
+**Progressive overload**:
+Systematically increasing the demand on a muscle over time — via load, volume, or intensity.
+_Avoid_: Pushing harder, levelling up
+
+**RPE (Rate of Perceived Exertion)**:
+A 1–10 self-rating of how hard a set felt, where 10 is failure and 8 means two reps left in the tank.
+_Avoid_: Effort score, intensity rating
+```
+
+## Rules
+
+- **Add a term only when the user understands it.** The glossary is a record of compressed knowledge, not a dictionary the user reads to learn. If the user has just been introduced to a concept, wait until they can use it correctly before promoting it here.
+- **Be opinionated.** When several words exist for the same concept, pick the best one and list the rest as aliases to avoid. This is how language compresses.
+- **Keep definitions tight.** One or two sentences. Define what the term IS, not what it does or how to do it.
+- **Use the glossary's own terms inside definitions.** Once a term is in the glossary, prefer it everywhere — including inside other definitions. This is what makes complex terms easier to grasp later.
+- **Group under subheadings** when natural clusters emerge (e.g. `## Anatomy`, `## Programming`). A flat list is fine when terms cohere.
+- **Flag ambiguities explicitly.** If a term is used loosely in the wider field, note the resolution: "In this workspace, 'set' always means a working set — warm-ups are tracked separately."
+- **Revise as understanding deepens.** A definition the user wrote in week one may be wrong by week six. Update in place; do not leave stale entries.